Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Deoxyribonucleotide Biosynthetic Process (GO:0009263) Genes Targeted by hsa-mir-873 in CA Colon Graudens Cluster 39 Table contains all genes in the CA Colon Graudens cluster number 39. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-873 GO:0009263 55706 TMEM48 transmembrane protein 48 [Source:HGNC Symbol;Acc:25525] zzz999 26003 GORASP2 golgi reassembly stacking protein 2, 55kDa [Source:HGNC Symbol;Acc:17500] T 56913 C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 [Source:HGNC Symbol;Acc:24337] zzz999 6120 RPE ribulose-5-phosphate-3-epimerase [Source:HGNC Symbol;Acc:10293] T 4927 NUP88 nucleoporin 88kDa [Source:HGNC Symbol;Acc:8067] zzz999 10237 SLC35B1 solute carrier family 35, member B1 [Source:HGNC Symbol;Acc:20798] zzz999 6941 TCF19 transcription factor 19 [Source:HGNC Symbol;Acc:11629] T 22938 SNW1 SNW domain containing 1 [Source:HGNC Symbol;Acc:16696] zzz999 23450 SF3B3 splicing factor 3b, subunit 3, 130kDa [Source:HGNC Symbol;Acc:10770] zzz999 9156 EXO1 exonuclease 1 [Source:HGNC Symbol;Acc:3511] zzz999 51729 WBP11 WW domain binding protein 11 [Source:HGNC Symbol;Acc:16461] zzz999 79161 C7orf23 chromosome 7 open reading frame 23 [Source:HGNC Symbol;Acc:21707] zzz999 25917 THUMPD3 THUMP domain containing 3 [Source:HGNC Symbol;Acc:24493] zzz999 27018 NGFRAP1 nerve growth factor receptor (TNFRSF16) associated protein 1 [Source:HGNC Symbol;Acc:13388] zzz999 54908 CCDC99 coiled-coil domain containing 99 [Source:HGNC Symbol;Acc:26010] zzz999 8614 STC2 stanniocalcin 2 [Source:HGNC Symbol;Acc:11374] T 26271 FBXO5 F-box protein 5 [Source:HGNC Symbol;Acc:13584] zzz999 4175 MCM6 minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:6949] T 84288 EFCAB2 EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:28166] zzz999 2739 GLO1 glyoxalase I [Source:HGNC Symbol;Acc:4323] zzz999 7531 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851] P T 5082 PDCL phosducin-like [Source:HGNC Symbol;Acc:8770] zzz999 86 ACTL6A actin-like 6A [Source:HGNC Symbol;Acc:24124] zzz999 4719 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) [Source:HGNC Symbol;Acc:7707] zzz999 3735 KARS lysyl-tRNA synthetase [Source:HGNC Symbol;Acc:6215] zzz999 29117 BRD7 bromodomain containing 7 [Source:HGNC Symbol;Acc:14310] zzz999 27258 LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17874] zzz999 10403 NDC80 NDC80 homolog, kinetochore complex component (S. cerevisiae) [Source:HGNC Symbol;Acc:16909] zzz999 55355 HJURP Holliday junction recognition protein [Source:HGNC Symbol;Acc:25444] zzz999 51373 MRPS17 mitochondrial ribosomal protein S17 [Source:HGNC Symbol;Acc:14047] zzz999 80135 RPF1 ribosome production factor 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30350] T 5557 PRIM1 primase, DNA, polypeptide 1 (49kDa) [Source:HGNC Symbol;Acc:9369] zzz999 9453 GGPS1 geranylgeranyl diphosphate synthase 1 [Source:HGNC Symbol;Acc:4249] zzz999 132 ADK adenosine kinase [Source:HGNC Symbol;Acc:257] T Yes 926 CD8B CD8b molecule [Source:HGNC Symbol;Acc:1707] zzz999 6749 SSRP1 structure specific recognition protein 1 [Source:HGNC Symbol;Acc:11327] zzz999 9025 RNF8 ring finger protein 8 [Source:HGNC Symbol;Acc:10071] T 59349 KLHL12 kelch-like 12 (Drosophila) [Source:HGNC Symbol;Acc:19360] T 9674 zzz999 zzz999 zzz999 23039 XPO7 exportin 7 [Source:HGNC Symbol;Acc:14108] P T 22823 MTF2 metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:29535] T 55718 POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD) [Source:HGNC Symbol;Acc:30347] T 53944 CSNK1G1 casein kinase 1, gamma 1 [Source:HGNC Symbol;Acc:2454] P T 1894 ECT2 epithelial cell transforming sequence 2 oncogene [Source:HGNC Symbol;Acc:3155] zzz999 84268 RPAIN RPA interacting protein [Source:HGNC Symbol;Acc:28641] zzz999 7298 TYMS thymidylate synthetase [Source:HGNC Symbol;Acc:12441] zzz999 Yes 51460 SFMBT1 Scm-like with four mbt domains 1 [Source:HGNC Symbol;Acc:20255] zzz999 80755 AARSD1 alanyl-tRNA synthetase domain containing 1 [Source:HGNC Symbol;Acc:28417] zzz999 2879 zzz999 zzz999 zzz999 6240 RRM1 ribonucleotide reductase M1 [Source:HGNC Symbol;Acc:10451] zzz999 Yes 3608 ILF2 interleukin enhancer binding factor 2, 45kDa [Source:HGNC Symbol;Acc:6037] zzz999 55339 WDR33 WD repeat domain 33 [Source:HGNC Symbol;Acc:25651] P 55835 CENPJ centromere protein J [Source:HGNC Symbol;Acc:17272] zzz999 55327 LIN7C lin-7 homolog C (C. elegans) [Source:HGNC Symbol;Acc:17789] T 11200 CHEK2 CHK2 checkpoint homolog (S. pombe) [Source:HGNC Symbol;Acc:16627] zzz999 7991 TUSC3 tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:30242] P T 55342 STRBP spermatid perinuclear RNA binding protein [Source:HGNC Symbol;Acc:16462] P T 10713 USP39 ubiquitin specific peptidase 39 [Source:HGNC Symbol;Acc:20071] T 5984 RFC4 replication factor C (activator 1) 4, 37kDa [Source:HGNC Symbol;Acc:9972] zzz999 4735 SEPT2 septin 2 [Source:HGNC Symbol;Acc:7729] zzz999 5217 PFN2 profilin 2 [Source:HGNC Symbol;Acc:8882] zzz999 10112 KIF20A kinesin family member 20A [Source:HGNC Symbol;Acc:9787] zzz999 4678 NASP nuclear autoantigenic sperm protein (histone-binding) [Source:HGNC Symbol;Acc:7644] T 1104 RCC1 regulator of chromosome condensation 1 [Source:HGNC Symbol;Acc:1913] T 9129 PRPF3 PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17348] zzz999 1690 COCH coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:HGNC Symbol;Acc:2180] zzz999 10313 RTN3 reticulon 3 [Source:HGNC Symbol;Acc:10469] P T

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